Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sinomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sinomicrobium |
| Species | Sinomicrobium oceani |
| Strain | strain CGMCC 1.12145 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1380713 bp
Thymine Count
1391607 bp
Guanine Count
1117537 bp
Cytosine Count
1132554 bp
Genome Length
5026272 bp
Protein-coding Genes
4225 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02927921_02119 | Not Available | Positive | 2474276 - 2474647 | 13670.7 |
| pectate lyase | SAMN02927921_02120 | Not Available | Positive | 2474764 - 2476479 | 63447.1 |
| hypothetical protein | SAMN02927921_02121 | Not Available | Positive | 2476541 - 2478229 | 62755.6 |
| protein of unknown function | SAMN02927921_02122 | Not Available | Positive | 2478325 - 2478996 | 25406.4 |
| hypothetical protein | SAMN02927921_02123 | Not Available | Positive | 2479167 - 2482289 | 116675.0 |
| putative collagen-binding domain of a collagenase | SAMN02927921_02124 | Not Available | Positive | 2482297 - 2483721 | 54258.1 |
| glycosyl hydrolases family 32 n-terminal domain-containing protein | SAMN02927921_02125 | Not Available | Positive | 2483808 - 2486525 | 102801.0 |
| alpha-l-rhamnosidase n-terminal domain-containing protein | SAMN02927921_02126 | Not Available | Positive | 2486525 - 2489332 | 104857.0 |
| acetyl xylan esterase (axe1) | SAMN02927921_02127 | Not Available | Positive | 2489342 - 2490790 | 54379.0 |
| alpha-l-fucosidase 2 | SAMN02927921_02128 | Not Available | Positive | 2490895 - 2493354 | 91280.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
