Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sinomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sinomicrobium |
| Species | Sinomicrobium oceani |
| Strain | strain CGMCC 1.12145 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1380713 bp
Thymine Count
1391607 bp
Guanine Count
1117537 bp
Cytosine Count
1132554 bp
Genome Length
5026272 bp
Protein-coding Genes
4225 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolase | SAMN02927921_02069 | Not Available | Positive | 2391223 - 2391873 | 23375.1 |
| alginate lyase | SAMN02927921_02070 | Not Available | Positive | 2391921 - 2392856 | 34858.3 |
| acetyl esterase/lipase | SAMN02927921_02071 | Not Available | Positive | 2392879 - 2393742 | 31777.8 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN02927921_02072 | Not Available | Positive | 2393903 - 2394880 | 36961.5 |
| pp_02047 | SAMN02927921_02073 | Not Available | Positive | 2395335 - 2396726 | Not Available |
| peptide chain release factor | SAMN02927921_02074 | Not Available | Positive | 2396726 - 2397418 | 26501.3 |
| hypothetical protein | SAMN02927921_02075 | Not Available | Positive | 2397402 - 2397935 | 20905.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02927921_02076 | Not Available | Positive | 2398214 - 2398765 | 21886.5 |
| fecr family protein | SAMN02927921_02077 | Not Available | Positive | 2398934 - 2400046 | 42095.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN02927921_02078 | Not Available | Positive | 2400151 - 2403762 | 133864.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
