Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sinomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sinomicrobium |
| Species | Sinomicrobium oceani |
| Strain | strain CGMCC 1.12145 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1380713 bp
Thymine Count
1391607 bp
Guanine Count
1117537 bp
Cytosine Count
1132554 bp
Genome Length
5026272 bp
Protein-coding Genes
4225 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (cmo5u34)-methyltransferase | SAMN02927921_01709 | Not Available | Positive | 1957975 - 1958697 | 27086.1 |
| l-threonine ammonia-lyase | SAMN02927921_01710 | Not Available | Positive | 1958758 - 1960020 | 46400.9 |
| glyceraldehyde-3-phosphate dehydrogenase (nadp+) | SAMN02927921_01711 | Not Available | Positive | 1960071 - 1961660 | 59036.9 |
| 3-isopropylmalate dehydrogenase | SAMN02927921_01712 | Not Available | Negative | 1961797 - 1962915 | 40483.5 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN02927921_01713 | Not Available | Negative | 1962912 - 1963508 | 22285.3 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN02927921_01714 | Not Available | Negative | 1963688 - 1965082 | 50871.9 |
| 2-isopropylmalate synthase | SAMN02927921_01715 | Not Available | Negative | 1965187 - 1966359 | 42603.0 |
| hypothetical protein | SAMN02927921_01716 | Not Available | Positive | 1966514 - 1968058 | 60999.5 |
| l-amino acid n-acyltransferase ynca | SAMN02927921_01717 | Not Available | Positive | 1968096 - 1968596 | 18765.7 |
| dna-binding regulatory protein, yebc/pmpr family | SAMN02927921_01718 | Not Available | Negative | 1968700 - 1969410 | 26701.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
