Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sinomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sinomicrobium |
| Species | Sinomicrobium oceani |
| Strain | strain CGMCC 1.12145 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1380713 bp
Thymine Count
1391607 bp
Guanine Count
1117537 bp
Cytosine Count
1132554 bp
Genome Length
5026272 bp
Protein-coding Genes
4225 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent exodnase (exonuclease v) beta subunit (contains helicase and exonuclease domains) | SAMN02927921_01539 | Not Available | Positive | 1758226 - 1761609 | 130534.0 |
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMN02927921_01540 | Not Available | Positive | 1762038 - 1763231 | 43615.6 |
| outer membrane protein ompa | SAMN02927921_01541 | Not Available | Positive | 1763345 - 1764688 | 47620.6 |
| pd-(d/e)xk nuclease superfamily protein | SAMN02927921_01542 | Not Available | Positive | 1764818 - 1767589 | 105797.0 |
| starch-binding associating with outer membrane | SAMN02927921_01543 | Not Available | Negative | 1767657 - 1769441 | 66257.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN02927921_01544 | Not Available | Negative | 1769466 - 1772750 | 121252.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN02927921_01545 | Not Available | Positive | 1773537 - 1776602 | 112549.0 |
| starch-binding associating with outer membrane | SAMN02927921_01546 | Not Available | Positive | 1776658 - 1778280 | 62355.2 |
| transcriptional regulator, laci family | SAMN02927921_01547 | Not Available | Negative | 1778413 - 1779462 | 39565.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02927921_01548 | Not Available | Positive | 1779928 - 1780503 | 22720.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
