Pseudomonas sp. NFACC04-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFACC04-2 is characterized by having a single replicon, which is indicative of its genomic structure. The genomic data for this strain is available under the accession number FPJC00000000.1, providing a basis for further genetic and functional studies. As a member of the Pseudomonas genus, NFACC04-2 is likely to exhibit traits common to this group, such as metabolic versatility and adaptability to various environments. Pseudomonas species are known for their capacity to thrive in diverse habitats, including soil, water, and plant surfaces, which suggests that NFACC04-2 may play a role in biogeochemical cycling or interactions within its ecosystem. The presence of a single replicon in Pseudomonas sp. NFACC04-2 may also imply a streamlined genomic organization, potentially influencing its growth and adaptability. This trait could have implications for its ecological interactions, such as nutrient utilization and competition with other microorganisms. In summary, Pseudomonas sp. NFACC04-2, with its single replicon and associated genomic data, represents a valuable organism for studying microbial ecology and the dynamics of microbial communities. Its traits align with the ecological roles typically attributed to Pseudomonas species, highlighting its potential significance in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFACC04-2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFACC04-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFACC04-2 genome assembly, contig:

Gene Summary

Adenine Count

1242653 bp

Thymine Count

1217819 bp

Guanine Count

1917056 bp

Cytosine Count

1973592 bp

Genome Length

6354990 bp

Protein-coding Genes

5429 genes

Non-Coding Genes

146 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sos-response transcriptional repressor lexa (reca-mediated autopeptidase)SAMN03159439_00873Not AvailableNegative1017854 - 101850124117.2
hypothetical proteinSAMN03159439_00874Not AvailablePositive1018632 - 101897312322.4
murein tripeptide amidase mpaaSAMN03159439_00876Not AvailablePositive1019485 - 102063043483.9
cytochrome b561SAMN03159439_00877Not AvailableNegative1020832 - 102136819623.1
catalaseSAMN03159439_00878Not AvailableNegative1021365 - 102244738313.2
rna polymerase sigma-70 factor, ecf subfamilySAMN03159439_00879Not AvailablePositive1022615 - 102312119466.4
transmembrane transcriptional regulator (anti-sigma factor rsiw)SAMN03159439_00880Not AvailablePositive1023118 - 102387027840.1
transcriptional regulator, iclr familySAMN03159439_00881Not AvailableNegative1024003 - 102491133260.3
putative spermidine/putrescine transport system atp-binding proteinSAMN03159439_00882Not AvailablePositive1025087 - 102611237228.9
putative spermidine/putrescine transport system permease proteinSAMN03159439_00883Not AvailablePositive1026109 - 102697831582.9

Displaying genes 971 – 980 of 5575 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.