Pseudomonas sp. NFACC04-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFACC04-2 is characterized by having a single replicon, which is indicative of its genomic structure. The genomic data for this strain is available under the accession number FPJC00000000.1, providing a basis for further genetic and functional studies. As a member of the Pseudomonas genus, NFACC04-2 is likely to exhibit traits common to this group, such as metabolic versatility and adaptability to various environments. Pseudomonas species are known for their capacity to thrive in diverse habitats, including soil, water, and plant surfaces, which suggests that NFACC04-2 may play a role in biogeochemical cycling or interactions within its ecosystem. The presence of a single replicon in Pseudomonas sp. NFACC04-2 may also imply a streamlined genomic organization, potentially influencing its growth and adaptability. This trait could have implications for its ecological interactions, such as nutrient utilization and competition with other microorganisms. In summary, Pseudomonas sp. NFACC04-2, with its single replicon and associated genomic data, represents a valuable organism for studying microbial ecology and the dynamics of microbial communities. Its traits align with the ecological roles typically attributed to Pseudomonas species, highlighting its potential significance in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFACC04-2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFACC04-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFACC04-2 genome assembly, contig:

Gene Summary

Adenine Count

1242653 bp

Thymine Count

1217819 bp

Guanine Count

1917056 bp

Cytosine Count

1973592 bp

Genome Length

6354990 bp

Protein-coding Genes

5429 genes

Non-Coding Genes

146 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
myo-inositol 2-dehydrogenase / d-chiro-inositol 1-dehydrogenaseSAMN03159439_00442Not AvailableNegative519653 - 52066336541.1
3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)SAMN03159439_00443Not AvailableNegative520693 - 52262470005.7
2-keto-myo-inositol isomeraseSAMN03159439_00444Not AvailableNegative522791 - 52361230187.3
malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenaseSAMN03159439_00445Not AvailableNegative523646 - 52514853418.1
5-deoxy-glucuronate isomeraseSAMN03159439_00446Not AvailableNegative525179 - 52598829695.8
inosose dehydrataseSAMN03159439_00447Not AvailableNegative525985 - 52687832601.8
5-dehydro-2-deoxygluconokinaseSAMN03159439_00449Not AvailableNegative527040 - 52897771088.2
transcriptional regulator, rpir familySAMN03159439_00450Not AvailablePositive529292 - 53021534378.0
glutathione s-transferaseSAMN03159439_00451Not AvailablePositive530245 - 53085622264.0
hydrogen cyanide synthase hcncSAMN03159439_00453Not AvailableNegative531082 - 53234145580.8

Displaying genes 551 – 560 of 5575 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.