Pseudomonas sp. NFACC04-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFACC04-2 is characterized by having a single replicon, which is indicative of its genomic structure. The genomic data for this strain is available under the accession number FPJC00000000.1, providing a basis for further genetic and functional studies. As a member of the Pseudomonas genus, NFACC04-2 is likely to exhibit traits common to this group, such as metabolic versatility and adaptability to various environments. Pseudomonas species are known for their capacity to thrive in diverse habitats, including soil, water, and plant surfaces, which suggests that NFACC04-2 may play a role in biogeochemical cycling or interactions within its ecosystem. The presence of a single replicon in Pseudomonas sp. NFACC04-2 may also imply a streamlined genomic organization, potentially influencing its growth and adaptability. This trait could have implications for its ecological interactions, such as nutrient utilization and competition with other microorganisms. In summary, Pseudomonas sp. NFACC04-2, with its single replicon and associated genomic data, represents a valuable organism for studying microbial ecology and the dynamics of microbial communities. Its traits align with the ecological roles typically attributed to Pseudomonas species, highlighting its potential significance in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFACC04-2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFACC04-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFACC04-2 genome assembly, contig:

Gene Summary

Adenine Count

1242653 bp

Thymine Count

1217819 bp

Guanine Count

1917056 bp

Cytosine Count

1973592 bp

Genome Length

6354990 bp

Protein-coding Genes

5429 genes

Non-Coding Genes

146 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
zn-dependent dipeptidase, dipeptidase homologSAMN03159439_05577Not AvailableNegative6180635 - 618200550050.7
hypothetical proteinSAMN03159439_05578Not AvailablePositive6182329 - 618394561636.5
hypothetical proteinSAMN03159439_05579Not AvailableNegative6184034 - 618436011782.1
vcbs repeat-containing proteinSAMN03159439_05581Not AvailableNegative6184704 - 618693674832.3
outer membrane protein, adhesin transport systemSAMN03159439_05582Not AvailablePositive6187390 - 618874850361.9
atp-binding cassette, subfamily c, lapbSAMN03159439_05583Not AvailablePositive6188779 - 619093877834.5
membrane fusion protein, adhesin transport systemSAMN03159439_05584Not AvailablePositive6191159 - 619252349890.8
dtw domain-containing protein yfipSAMN03159439_05585Not AvailableNegative6192671 - 619326721815.7
transcriptional regulator, lysr familySAMN03159439_05586Not AvailableNegative6193270 - 619416333283.1
agmatinaseSAMN03159439_05587Not AvailablePositive6194412 - 619536234172.2

Displaying genes 5481 – 5490 of 5575 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.