Pseudomonas sp. NFACC04-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFACC04-2 is characterized by having a single replicon, which is indicative of its genomic structure. The genomic data for this strain is available under the accession number FPJC00000000.1, providing a basis for further genetic and functional studies. As a member of the Pseudomonas genus, NFACC04-2 is likely to exhibit traits common to this group, such as metabolic versatility and adaptability to various environments. Pseudomonas species are known for their capacity to thrive in diverse habitats, including soil, water, and plant surfaces, which suggests that NFACC04-2 may play a role in biogeochemical cycling or interactions within its ecosystem. The presence of a single replicon in Pseudomonas sp. NFACC04-2 may also imply a streamlined genomic organization, potentially influencing its growth and adaptability. This trait could have implications for its ecological interactions, such as nutrient utilization and competition with other microorganisms. In summary, Pseudomonas sp. NFACC04-2, with its single replicon and associated genomic data, represents a valuable organism for studying microbial ecology and the dynamics of microbial communities. Its traits align with the ecological roles typically attributed to Pseudomonas species, highlighting its potential significance in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFACC04-2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFACC04-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFACC04-2 genome assembly, contig:

Gene Summary

Adenine Count

1242653 bp

Thymine Count

1217819 bp

Guanine Count

1917056 bp

Cytosine Count

1973592 bp

Genome Length

6354990 bp

Protein-coding Genes

5429 genes

Non-Coding Genes

146 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseSAMN03159439_00019Not AvailablePositive21189 - 2186624106.9
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseSAMN03159439_00020Not AvailablePositive21863 - 2263328601.9
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseSAMN03159439_00021Not AvailablePositive22639 - 2409952777.4
3,4-dihydroxyphenylacetate 2,3-dioxygenaseSAMN03159439_00022Not AvailablePositive24314 - 2517131855.0
5-carboxymethyl-2-hydroxymuconate isomeraseSAMN03159439_00023Not AvailablePositive25256 - 2564814892.9
sugar phosphate permeaseSAMN03159439_00024Not AvailablePositive25700 - 2700446791.1
2-oxo-hept-3-ene-1,7-dioate hydrataseSAMN03159439_00025Not AvailablePositive27017 - 2782029401.2
4-hydroxy-2-oxoheptanedioate aldolaseSAMN03159439_00026Not AvailablePositive27835 - 2863228030.9
homoprotocatechuate degradation operon regulator, hparSAMN03159439_00027Not AvailableNegative28704 - 2912616206.0
nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) familySAMN03159439_00028Not AvailableNegative29407 - 3034834871.2

Displaying genes 131 – 140 of 5575 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.