Chitinophaga sancti strain DSM 784

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga sancti strain DSM 784 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is part of the diverse microbial community found in soil habitats, where it plays a role in the decomposition of organic matter. With a single replicon, Chitinophaga sancti has a streamlined genetic structure that may contribute to its adaptability in soil environments. The genome of this strain is cataloged under the accession number FPIZ00000000.1, providing a reference point for genomic studies and further investigation into its metabolic capabilities and ecological functions. The presence of Chitinophaga sancti in soil ecosystems suggests its potential involvement in nutrient cycling, particularly in the degradation of chitin, a biopolymer abundant in the exoskeletons of arthropods and fungal cell walls. This capability may enhance soil health and fertility by facilitating the breakdown of complex organic materials, thereby releasing nutrients that are vital for plant growth and supporting a diverse array of soil organisms. In summary, Chitinophaga sancti strain DSM 784 exemplifies the ecological importance of soil microbiota, contributing to the decomposition processes and nutrient availability within its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga sancti
Strainstrain DSM 784

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga sancti strain DSM 784 genome assembly, contig:

Gene Summary

Adenine Count

2298604 bp

Thymine Count

2295917 bp

Guanine Count

1821390 bp

Cytosine Count

1822295 bp

Genome Length

8244109 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
microcystin-dependent proteinSAMN05661012_00511Not AvailableNegative576385 - 57693618839.2
arac-type dna-binding proteinSAMN05661012_00512Not AvailableNegative577101 - 57797934363.0
uncharacterized damage-inducible protein dinb (forms a four-helix bundle)SAMN05661012_00513Not AvailableNegative578113 - 57864019445.4
dna-binding transcriptional regulator, lysr familySAMN05661012_00514Not AvailableNegative578666 - 57957134747.1
modulator of drug activity bSAMN05661012_00515Not AvailablePositive579662 - 58026422851.9
hypothetical proteinSAMN05661012_00516Not AvailablePositive580399 - 58070111947.5
abc-type multidrug transport system, atpase componentSAMN05661012_00517Not AvailablePositive580704 - 58136024693.3
pp_00509SAMN05661012_00518Not AvailablePositive581450 - 582580Not Available
nadph-dependent ferric siderophore reductase, contains fad-binding and sip domainsSAMN05661012_00519Not AvailablePositive582733 - 58353630145.5
cupin domain-containing proteinSAMN05661012_00520Not AvailableNegative583567 - 58440032251.4

Displaying genes 511 – 520 of 6771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.