Chitinophaga sancti strain DSM 784

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga sancti strain DSM 784 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is part of the diverse microbial community found in soil habitats, where it plays a role in the decomposition of organic matter. With a single replicon, Chitinophaga sancti has a streamlined genetic structure that may contribute to its adaptability in soil environments. The genome of this strain is cataloged under the accession number FPIZ00000000.1, providing a reference point for genomic studies and further investigation into its metabolic capabilities and ecological functions. The presence of Chitinophaga sancti in soil ecosystems suggests its potential involvement in nutrient cycling, particularly in the degradation of chitin, a biopolymer abundant in the exoskeletons of arthropods and fungal cell walls. This capability may enhance soil health and fertility by facilitating the breakdown of complex organic materials, thereby releasing nutrients that are vital for plant growth and supporting a diverse array of soil organisms. In summary, Chitinophaga sancti strain DSM 784 exemplifies the ecological importance of soil microbiota, contributing to the decomposition processes and nutrient availability within its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga sancti
Strainstrain DSM 784

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga sancti strain DSM 784 genome assembly, contig:

Gene Summary

Adenine Count

2298604 bp

Thymine Count

2295917 bp

Guanine Count

1821390 bp

Cytosine Count

1822295 bp

Genome Length

8244109 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha-l-fucosidaseSAMN05661012_00410Not AvailablePositive460689 - 46261471338.7
protein of unknown functionSAMN05661012_00411Not AvailablePositive462777 - 46331320070.2
uncharacterized damage-inducible protein dinb (forms a four-helix bundle)SAMN05661012_00412Not AvailableNegative463456 - 46395019172.1
predicted purr-regulated permease permSAMN05661012_00413Not AvailableNegative464019 - 46506539139.8
phnb proteinSAMN05661012_00414Not AvailableNegative465129 - 46554815124.9
amino acid/polyamine/organocation transporter, apc superfamilySAMN05661012_00415Not AvailablePositive465827 - 46728752579.7
acetyltransferase (gnat) family proteinSAMN05661012_00416Not AvailablePositive467259 - 46771117281.8
c-terminal processing protease ctpa/prc, contains a pdz domainSAMN05661012_00417Not AvailablePositive467807 - 471004118992.0
ethanolamine permeaseSAMN05661012_00418Not AvailablePositive471129 - 47245147459.9
ethanolamine ammonia-lyase heavy chainSAMN05661012_00419Not AvailablePositive472472 - 47384249667.6

Displaying genes 411 – 420 of 6771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.