Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type multidrug transport system, atpase and permease component | SAMN02910280_1373 | Not Available | Negative | 1116032 - 1117756 | 64188.5 |
| hypothetical protein | SAMN02910280_1374 | Not Available | Negative | 1117753 - 1118190 | 17335.3 |
| coenzyme pqq synthesis protein d (pqqd) | SAMN02910280_1375 | Not Available | Negative | 1118183 - 1118443 | 9401.34 |
| hypothetical protein | SAMN02910280_1376 | Not Available | Negative | 1118449 - 1119183 | 27409.0 |
| radical sam additional 4fe4s-binding spasm domain-containing protein | SAMN02910280_1377 | Not Available | Negative | 1119164 - 1120543 | 53100.5 |
| hypothetical protein | SAMN02910280_1378 | Not Available | Negative | 1120839 - 1122543 | 61286.5 |
| signal transduction histidine kinase | SAMN02910280_1380 | Not Available | Positive | 1122665 - 1123726 | 38838.0 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN02910280_1381 | Not Available | Positive | 1123918 - 1124541 | 22988.0 |
| fn3 associated | SAMN02910280_1382 | Not Available | Negative | 1124728 - 1128033 | 116729.0 |
| tigr02453 family protein | SAMN02910280_1383 | Not Available | Positive | 1128642 - 1129388 | 29357.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
