Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910280_1353 | Not Available | Positive | 1093793 - 1094257 | 17109.6 |
| protoporphyrinogen ix oxidase, menaquinone-dependent (flavodoxin domain) | SAMN02910280_1354 | Not Available | Negative | 1094297 - 1094827 | 20023.1 |
| o-acetylhomoserine (thiol)-lyase | SAMN02910280_1355 | Not Available | Negative | 1094903 - 1096171 | 45899.9 |
| uncharacterized protein | SAMN02910280_1356 | Not Available | Negative | 1096196 - 1096702 | 19685.9 |
| glutamate dehydrogenase (nadp+) | SAMN02910280_1357 | Not Available | Positive | 1097070 - 1098437 | 49301.9 |
| cytidylate kinase | SAMN02910280_1358 | Not Available | Positive | 1098685 - 1099308 | 23671.2 |
| uncharacterized membrane protein ycap, duf421 family | SAMN02910280_1359 | Not Available | Positive | 1099359 - 1100066 | 25950.7 |
| protein of unknown function | SAMN02910280_1360 | Not Available | Positive | 1100063 - 1100440 | 14285.2 |
| hypothetical protein | SAMN02910280_1361 | Not Available | Negative | 1100515 - 1101012 | 18244.6 |
| peptide chain release factor 2 | SAMN02910280_1362 | Not Available | Negative | 1101048 - 1102166 | 42386.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
