Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910280_1343 | Not Available | Negative | 1083391 - 1084356 | 37227.2 |
| hypothetical protein | SAMN02910280_1344 | Not Available | Negative | 1084753 - 1085724 | 34658.3 |
| hypothetical protein | SAMN02910280_1345 | Not Available | Negative | 1086043 - 1087212 | 41890.3 |
| rna polymerase sigma factor | SAMN02910280_1346 | Not Available | Negative | 1087209 - 1087931 | 27848.2 |
| acetyl-coa synthetase | SAMN02910280_1347 | Not Available | Negative | 1088161 - 1089837 | 63551.6 |
| helix-turn-helix domain-containing protein | SAMN02910280_1348 | Not Available | Negative | 1089877 - 1090422 | 20594.4 |
| hypothetical protein | SAMN02910280_1349 | Not Available | Negative | 1090578 - 1091039 | 16942.8 |
| zinc transport system permease protein | SAMN02910280_1350 | Not Available | Negative | 1091040 - 1091909 | 30649.0 |
| zinc transport system atp-binding protein | SAMN02910280_1351 | Not Available | Negative | 1091902 - 1092624 | 26446.3 |
| zinc transport system substrate-binding protein | SAMN02910280_1352 | Not Available | Negative | 1092624 - 1093610 | 36446.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
