Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910280_1333 | Not Available | Positive | 1072325 - 1073749 | 54625.2 |
| hypothetical protein | SAMN02910280_1334 | Not Available | Positive | 1073967 - 1074170 | 7893.62 |
| signal transduction histidine kinase | SAMN02910280_1335 | Not Available | Negative | 1074249 - 1075481 | 45952.1 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN02910280_1336 | Not Available | Negative | 1075483 - 1076148 | 25045.4 |
| putative abc transport system atp-binding protein | SAMN02910280_1337 | Not Available | Negative | 1076150 - 1076914 | 28696.1 |
| putative abc transport system permease protein | SAMN02910280_1338 | Not Available | Negative | 1076930 - 1079296 | 87160.8 |
| hypothetical protein | SAMN02910280_1339 | Not Available | Negative | 1079443 - 1081176 | 66483.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02910280_1340 | Not Available | Negative | 1081181 - 1081747 | 21371.4 |
| predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domains | SAMN02910280_1341 | Not Available | Positive | 1082116 - 1082961 | 30719.0 |
| hypothetical protein | SAMN02910280_1342 | Not Available | Negative | 1083003 - 1083380 | 14652.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
