Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system atp-binding protein | SAMN02910280_1313 | Not Available | Negative | 1046875 - 1047876 | 37762.9 |
| carbohydrate binding domain-containing protein | SAMN02910280_1314 | Not Available | Positive | 1048183 - 1049526 | 49524.4 |
| hypothetical protein | SAMN02910280_1315 | Not Available | Positive | 1049769 - 1050371 | 22276.6 |
| acetyltransferase (gnat) domain-containing protein | SAMN02910280_1316 | Not Available | Positive | 1050406 - 1050849 | 16736.9 |
| hypothetical protein | SAMN02910280_1317 | Not Available | Positive | 1050863 - 1051030 | 6644.88 |
| nucleoside-diphosphate-sugar epimerase | SAMN02910280_1318 | Not Available | Negative | 1051381 - 1052388 | 37763.8 |
| hypothetical protein | SAMN02910280_1319 | Not Available | Negative | 1052399 - 1053577 | 42417.6 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910280_1320 | Not Available | Negative | 1053743 - 1054810 | 41050.4 |
| muts domain v | SAMN02910280_1321 | Not Available | Positive | 1055079 - 1056746 | 63208.4 |
| hypothetical protein | SAMN02910280_1322 | Not Available | Negative | 1056915 - 1057490 | 20977.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
