Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative hydrolases of hd superfamily | SAMN02910280_1303 | Not Available | Positive | 1036941 - 1037501 | 21671.6 |
| glycosyl hydrolases family 11 | SAMN02910280_1304 | Not Available | Positive | 1037639 - 1039798 | 81907.6 |
| atp-binding cassette, subfamily f, uup | SAMN02910280_1305 | Not Available | Negative | 1039836 - 1041629 | 67775.9 |
| hypothetical protein | SAMN02910280_1306 | Not Available | Positive | 1041937 - 1042257 | 12587.7 |
| 16s rrna pseudouridine516 synthase | SAMN02910280_1307 | Not Available | Negative | 1042232 - 1042831 | 23013.0 |
| lysophospholipase l1 | SAMN02910280_1308 | Not Available | Positive | 1042970 - 1043953 | 35373.8 |
| acylphosphatase | SAMN02910280_1309 | Not Available | Positive | 1043966 - 1044235 | 10315.1 |
| ferredoxin-dependent bilin reductase | SAMN02910280_1310 | Not Available | Negative | 1044276 - 1045082 | 30713.1 |
| abc-2 type transport system permease protein | SAMN02910280_1311 | Not Available | Negative | 1045265 - 1046068 | 31172.8 |
| abc-2 type transport system permease protein | SAMN02910280_1312 | Not Available | Negative | 1046075 - 1046878 | 30014.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
