Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910280_1293 | Not Available | Positive | 1024636 - 1025805 | 43863.8 |
| leucine rich repeat-containing protein | SAMN02910280_1294 | Not Available | Negative | 1026028 - 1027176 | 42683.9 |
| hypothetical protein | SAMN02910280_1295 | Not Available | Negative | 1027340 - 1028734 | 52158.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02910280_1296 | Not Available | Negative | 1028749 - 1029315 | 21297.2 |
| hypothetical protein | SAMN02910280_1297 | Not Available | Positive | 1029538 - 1030476 | 36553.1 |
| site-specific dna recombinase | SAMN02910280_1298 | Not Available | Positive | 1031103 - 1031819 | 27071.7 |
| adenine/guanine phosphoribosyltransferase | SAMN02910280_1299 | Not Available | Positive | 1031930 - 1033537 | 61228.5 |
| crcb protein | SAMN02910280_1300 | Not Available | Positive | 1033635 - 1034009 | 12640.8 |
| hypothetical protein | SAMN02910280_1301 | Not Available | Positive | 1034023 - 1034460 | 15776.8 |
| lysophospholipase l1 | SAMN02910280_1302 | Not Available | Negative | 1034522 - 1036594 | 73674.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
