Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-glu | Not Available | Not Available | Positive | 934674 - 934750 | Not Available |
| helix-turn-helix | SAMN02910280_1220 | Not Available | Negative | 934763 - 934987 | 8226.27 |
| hypothetical protein | SAMN02910280_1221 | Not Available | Negative | 935871 - 936386 | 20089.9 |
| protein of unknown function duf262 | SAMN02910280_1222 | Not Available | Negative | 936397 - 937560 | 45393.2 |
| t/g mismatch-specific endonuclease | SAMN02910280_1223 | Not Available | Negative | 937695 - 938117 | 16550.1 |
| dna (cytosine-5)-methyltransferase 1 | SAMN02910280_1224 | Not Available | Negative | 938104 - 939396 | 50287.1 |
| aipr protein | SAMN02910280_1225 | Not Available | Negative | 939393 - 941654 | 86449.8 |
| putative pd-(d/e)xk family member | SAMN02910280_1226 | Not Available | Negative | 941669 - 942583 | 35553.9 |
| z1 domain-containing protein | SAMN02910280_1227 | Not Available | Negative | 942583 - 945393 | 107523.0 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN02910280_1228 | Not Available | Negative | 945371 - 946876 | 57790.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
