Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fic family protein | SAMN02910280_1178 | Not Available | Positive | 881581 - 882789 | 46455.6 |
| cubico group peptidase, beta-lactamase class c family | SAMN02910280_1179 | Not Available | Negative | 882841 - 883839 | 38071.8 |
| na+-driven multidrug efflux pump | SAMN02910280_1180 | Not Available | Positive | 884187 - 885497 | 49406.8 |
| restriction system protein | SAMN02910280_1181 | Not Available | Positive | 885808 - 887487 | 64394.0 |
| uncharacterized conserved protein, contains parb-like and hnh nuclease domains | SAMN02910280_1182 | Not Available | Positive | 887576 - 889315 | 68458.5 |
| recb family exonuclease | SAMN02910280_1183 | Not Available | Positive | 889530 - 892037 | 93441.5 |
| pd-(d/e)xk nuclease superfamily protein | SAMN02910280_1184 | Not Available | Positive | 892037 - 895300 | 124841.0 |
| hypothetical protein | SAMN02910280_1185 | Not Available | Negative | 895335 - 895814 | 18318.4 |
| hypothetical protein | SAMN02910280_1187 | Not Available | Negative | 896500 - 897291 | 30915.0 |
| hypothetical protein | SAMN02910280_1188 | Not Available | Negative | 897549 - 898058 | 19350.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
