Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 87593 - 87709 | 18.01 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910280_0449 | Not Available | Negative | 87703 - 89625 | 72150.7 |
| inorganic pyrophosphatase | SAMN02910280_0450 | Not Available | Positive | 90020 - 90550 | 20541.7 |
| ribose-phosphate pyrophosphokinase | SAMN02910280_0451 | Not Available | Positive | 90622 - 91767 | 42569.1 |
| putative abc transport system permease protein | SAMN02910280_0452 | Not Available | Positive | 91945 - 94944 | 110080.0 |
| enterochelin esterase | SAMN02910280_0453 | Not Available | Negative | 95060 - 97495 | 87226.0 |
| beta-xylosidase | SAMN02910280_0454 | Not Available | Positive | 98011 - 101028 | 110770.0 |
| arac-type dna-binding protein | SAMN02910280_0455 | Not Available | Positive | 101233 - 101985 | 28751.3 |
| helix-turn-helix domain-containing protein | SAMN02910280_0456 | Not Available | Positive | 102182 - 102973 | 30575.4 |
| beta-glucanase, gh16 family | SAMN02910280_0457 | Not Available | Positive | 103050 - 105905 | 107417.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
