Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific recombinase xerd | SAMN02910280_1136 | Not Available | Negative | 835717 - 837180 | 55939.9 |
| dna binding domain-containing protein, excisionase family | SAMN02910280_1137 | Not Available | Negative | 837238 - 837462 | 8401.44 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN02910280_1138 | Not Available | Negative | 837514 - 838917 | 51720.5 |
| hypothetical protein | SAMN02910280_1139 | Not Available | Negative | 838914 - 839267 | 12839.1 |
| phage/plasmid primase, p4 family, c-terminal domain-containing protein | SAMN02910280_1140 | Not Available | Negative | 839264 - 840679 | 53496.2 |
| hypothetical protein | SAMN02910280_1141 | Not Available | Positive | 840873 - 841892 | 40286.0 |
| glutamine amidotransferase domain-containing protein | SAMN02910280_1142 | Not Available | Negative | 841936 - 842892 | 36224.0 |
| putative amidoligase enzyme | SAMN02910280_1143 | Not Available | Negative | 842894 - 843994 | 42443.1 |
| protein of unknown function | SAMN02910280_1144 | Not Available | Negative | 844058 - 844342 | 10864.9 |
| dna binding domain-containing protein, excisionase family | SAMN02910280_1145 | Not Available | Positive | 844546 - 844737 | 7410.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
