Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pd-(d/e)xk nuclease superfamily protein | SAMN02910280_1106 | Not Available | Positive | 798291 - 799904 | 61283.6 |
| protein of unknown function | SAMN02910280_1107 | Not Available | Positive | 800283 - 800567 | 10947.1 |
| putative amidoligase enzyme | SAMN02910280_1108 | Not Available | Positive | 800616 - 801728 | 42621.2 |
| hypothetical protein | SAMN02910280_1109 | Not Available | Positive | 801729 - 801920 | 7243.2 |
| glutamine amidotransferase domain-containing protein | SAMN02910280_1110 | Not Available | Positive | 801937 - 802926 | 37367.0 |
| site-specific recombinase xerd | SAMN02910280_1111 | Not Available | Positive | 802926 - 804101 | 45425.2 |
| serine protease, subtilisin family | SAMN02910280_1112 | Not Available | Positive | 804331 - 810384 | 219981.0 |
| dtdp-glucose 4,6-dehydratase | SAMN02910280_1113 | Not Available | Negative | 810481 - 811509 | 39359.1 |
| glucose-1-phosphate thymidylyltransferase | SAMN02910280_1114 | Not Available | Negative | 811522 - 812409 | 32165.6 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN02910280_1115 | Not Available | Positive | 813197 - 814483 | 47856.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
