Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| probable phosphoglycerate mutase | SAMN02910280_1086 | Not Available | Negative | 778286 - 779014 | 27388.4 |
| hypothetical protein | SAMN02910280_1087 | Not Available | Positive | 779322 - 779540 | 8146.05 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN02910280_1088 | Not Available | Positive | 779818 - 780519 | 26362.6 |
| hamp domain-containing protein | SAMN02910280_1089 | Not Available | Positive | 780516 - 781793 | 47980.6 |
| putative abc transport system atp-binding protein | SAMN02910280_1090 | Not Available | Positive | 781893 - 782657 | 28035.0 |
| macb-like core domain-containing protein | SAMN02910280_1091 | Not Available | Positive | 782651 - 784990 | 86735.9 |
| hypothetical protein | SAMN02910280_1092 | Not Available | Positive | 785012 - 785704 | 25658.3 |
| hypothetical protein | SAMN02910280_1093 | Not Available | Negative | 785811 - 786005 | 7664.23 |
| methyltransferase domain-containing protein | SAMN02910280_1094 | Not Available | Negative | 786026 - 786799 | 31123.1 |
| carbonic anhydrase | SAMN02910280_1095 | Not Available | Negative | 786918 - 787487 | 20805.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
