Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein muts2 | SAMN02910280_1004 | Not Available | Positive | 693644 - 696034 | 89044.1 |
| cation diffusion facilitator family transporter | SAMN02910280_1005 | Not Available | Negative | 696201 - 697307 | 40207.8 |
| tery-c metal binding domain-containing protein | SAMN02910280_1006 | Not Available | Negative | 697558 - 697917 | 13677.1 |
| dna-binding transcriptional regulator, laci/purr family | SAMN02910280_1007 | Not Available | Negative | 697907 - 700144 | 85201.1 |
| atp-binding cassette, subfamily f, member 3 | SAMN02910280_1008 | Not Available | Positive | 700949 - 702874 | 73186.3 |
| hypothetical protein | SAMN02910280_1009 | Not Available | Positive | 702889 - 703833 | 34457.8 |
| six-cysteine peptide sciff | SAMN02910280_1010 | Not Available | Positive | 703949 - 704086 | 4816.9 |
| uncharacterized protein | SAMN02910280_1011 | Not Available | Positive | 704157 - 705524 | 51994.7 |
| helix-turn-helix domain-containing protein | SAMN02910280_1012 | Not Available | Positive | 705597 - 706385 | 30214.2 |
| d-alanyl-d-alanine carboxypeptidase | SAMN02910280_1013 | Not Available | Positive | 706622 - 707680 | 39437.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
