Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine synthase | SAMN02910280_0984 | Not Available | Positive | 666248 - 667099 | 32803.9 |
| agmatinase | SAMN02910280_0985 | Not Available | Positive | 667089 - 667940 | 31471.0 |
| protein of unknown function | SAMN02910280_0986 | Not Available | Positive | 667963 - 668562 | 22921.3 |
| protein of unknown function | SAMN02910280_0987 | Not Available | Positive | 668592 - 669194 | 21914.2 |
| ribosomal protein s18 acetylase rimi | SAMN02910280_0988 | Not Available | Positive | 669221 - 669682 | 17317.0 |
| saccharopine dehydrogenase (nad+, l-lysine forming) | SAMN02910280_0989 | Not Available | Positive | 669705 - 670907 | 44992.1 |
| vanz like family protein | SAMN02910280_0990 | Not Available | Positive | 670909 - 671397 | 18605.2 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN02910280_0991 | Not Available | Positive | 671400 - 672065 | 23914.3 |
| carboxynorspermidine decarboxylase | SAMN02910280_0992 | Not Available | Positive | 672062 - 673201 | 43073.5 |
| 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase | SAMN02910280_0993 | Not Available | Positive | 673201 - 673773 | 21737.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
