Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910280_0974 | Not Available | Positive | 656155 - 656901 | 26969.0 |
| cyth domain-containing protein | SAMN02910280_0975 | Not Available | Positive | 657052 - 657564 | 19588.1 |
| phosphate starvation-inducible protein phoh | SAMN02910280_0976 | Not Available | Positive | 657570 - 658538 | 35483.9 |
| probable rrna maturation factor | SAMN02910280_0977 | Not Available | Positive | 658531 - 659043 | 19023.8 |
| gtp-binding protein era | SAMN02910280_0978 | Not Available | Positive | 659043 - 659936 | 33146.4 |
| dna replication and repair protein reco | SAMN02910280_0979 | Not Available | Positive | 660103 - 660846 | 28007.8 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910280_0980 | Not Available | Positive | 660982 - 662889 | 72257.7 |
| s-adenosylmethionine decarboxylase | SAMN02910280_0981 | Not Available | Positive | 663316 - 664086 | 29245.6 |
| arginine/lysine/ornithine decarboxylase | SAMN02910280_0982 | Not Available | Positive | 664079 - 665530 | 53452.5 |
| hypothetical protein | SAMN02910280_0983 | Not Available | Positive | 665584 - 666081 | 17751.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
