Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein yxji | SAMN02910280_0428 | Not Available | Negative | 64246 - 64719 | 18507.2 |
| trna g18 (ribose-2'-o)-methylase spou | SAMN02910280_0429 | Not Available | Negative | 64749 - 65561 | 29749.7 |
| dna ligase (nad+) | SAMN02910280_0430 | Not Available | Positive | 65947 - 67902 | 72006.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02910280_0431 | Not Available | Positive | 68395 - 68892 | 19442.3 |
| putative zinc-finger | SAMN02910280_0432 | Not Available | Positive | 68889 - 69704 | 31084.5 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910280_0433 | Not Available | Negative | 69740 - 70831 | 41236.7 |
| cpxc protein | SAMN02910280_0434 | Not Available | Negative | 70953 - 71609 | 25316.2 |
| protein of unknown function | SAMN02910280_0435 | Not Available | Negative | 71648 - 71929 | 10669.7 |
| fucose 4-o-acetylase | SAMN02910280_0436 | Not Available | Negative | 71948 - 73078 | 43616.9 |
| nitroreductase | SAMN02910280_0437 | Not Available | Negative | 73122 - 73739 | 23363.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
