Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent deacetylase | SAMN02910280_0954 | Not Available | Negative | 634697 - 635410 | 26176.4 |
| secondary thiamine-phosphate synthase enzyme | SAMN02910280_0955 | Not Available | Negative | 635414 - 635809 | 14426.2 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN02910280_0956 | Not Available | Negative | 636207 - 636842 | 23762.8 |
| hypothetical protein | SAMN02910280_0957 | Not Available | Negative | 636839 - 637198 | 14330.0 |
| mannan endo-1,4-beta-mannosidase | SAMN02910280_0958 | Not Available | Positive | 637499 - 639739 | 82154.4 |
| cytidylate kinase | SAMN02910280_0959 | Not Available | Negative | 639810 - 640406 | 22863.3 |
| na+/h+ antiporter nhad | SAMN02910280_0960 | Not Available | Negative | 640427 - 641779 | 48410.1 |
| cation:h+ antiporter | SAMN02910280_0961 | Not Available | Positive | 642256 - 643194 | 32675.4 |
| hypothetical protein | SAMN02910280_0962 | Not Available | Positive | 643208 - 643588 | 13968.8 |
| hypothetical protein | SAMN02910280_0963 | Not Available | Positive | 643608 - 643961 | 13028.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
