Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910280_0931 | Not Available | Negative | 607442 - 608461 | 38563.1 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN02910280_0932 | Not Available | Negative | 608663 - 610537 | 71900.4 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910280_0933 | Not Available | Positive | 610870 - 612759 | 71322.5 |
| muts domain v | SAMN02910280_0934 | Not Available | Negative | 613034 - 614773 | 65664.5 |
| coth protein | SAMN02910280_0935 | Not Available | Positive | 614931 - 616565 | 61496.5 |
| Trna-met | Not Available | Not Available | Positive | 616649 - 616722 | Not Available |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 616771 - 616887 | 18.01 |
| dna helicase-2 / atp-dependent dna helicase pcra | SAMN02910280_0940 | Not Available | Positive | 617445 - 619805 | 89168.2 |
| pyruvate kinase | SAMN02910280_0941 | Not Available | Positive | 619835 - 621259 | 51792.4 |
| hypothetical protein | SAMN02910280_0942 | Not Available | Positive | 621256 - 622086 | 30492.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
