Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative glycosyl hydrolase domain-containing protein | SAMN02910280_0911 | Not Available | Negative | 590370 - 591572 | 43818.6 |
| electron transport complex protein rnfa | SAMN02910280_0912 | Not Available | Negative | 591607 - 592179 | 20574.5 |
| electron transport complex protein rnfe | SAMN02910280_0913 | Not Available | Negative | 592163 - 592795 | 23191.1 |
| na+-translocating ferredoxin:nad+ oxidoreductase rnf, rnfd subunit | SAMN02910280_0914 | Not Available | Negative | 592788 - 593771 | 35872.6 |
| ribulose-phosphate 3-epimerase | SAMN02910280_0915 | Not Available | Negative | 593765 - 594424 | 23888.0 |
| rna polymerase sporulation-specific sigma factor | SAMN02910280_0916 | Not Available | Positive | 594661 - 595344 | 25671.9 |
| nucleoside-diphosphate-sugar epimerase | SAMN02910280_0917 | Not Available | Positive | 595434 - 596345 | 35093.6 |
| hd domain-containing protein | SAMN02910280_0918 | Not Available | Positive | 596342 - 596785 | 16948.1 |
| dnad and phage-associated domain-containing protein | SAMN02910280_0919 | Not Available | Positive | 596867 - 597847 | 36439.4 |
| dna replication protein dnac | SAMN02910280_0920 | Not Available | Positive | 597860 - 598819 | 36635.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
