Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 1 | SAMN02910280_0901 | Not Available | Negative | 579240 - 580313 | 40593.9 |
| hypothetical protein | SAMN02910280_0902 | Not Available | Negative | 580363 - 580551 | 7067.79 |
| hypothetical protein | SAMN02910280_0903 | Not Available | Positive | 580722 - 581078 | 13069.8 |
| s1 rna binding domain-containing protein | SAMN02910280_0904 | Not Available | Positive | 581140 - 582057 | 33755.6 |
| 6-phosphofructokinase | SAMN02910280_0905 | Not Available | Negative | 582101 - 583063 | 34217.3 |
| dna polymerase-3 subunit alpha | SAMN02910280_0906 | Not Available | Negative | 583204 - 586611 | 127359.0 |
| hypothetical protein | SAMN02910280_0907 | Not Available | Negative | 586601 - 587428 | 30666.8 |
| upf0042 nucleotide-binding protein | SAMN02910280_0908 | Not Available | Negative | 587527 - 588399 | 33512.3 |
| udp-n-acetylmuramate dehydrogenase | SAMN02910280_0909 | Not Available | Negative | 588426 - 589328 | 32241.8 |
| hpr(ser) kinase/phosphatase | SAMN02910280_0910 | Not Available | Negative | 589370 - 590329 | 36323.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
