Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease j | SAMN02910280_0871 | Not Available | Positive | 541319 - 543145 | 67030.8 |
| c-di-amp phosphodiesterase, consists of a ggdef-like and dhh domains | SAMN02910280_0872 | Not Available | Positive | 543201 - 545177 | 72865.7 |
| large subunit ribosomal protein l9 | SAMN02910280_0873 | Not Available | Positive | 545196 - 545642 | 15582.8 |
| replicative dna helicase | SAMN02910280_0874 | Not Available | Positive | 545655 - 547010 | 50552.5 |
| trna(ile)-lysidine synthase | SAMN02910280_0875 | Not Available | Positive | 547007 - 548344 | 49603.6 |
| cell division protease ftsh | SAMN02910280_0876 | Not Available | Positive | 548362 - 550263 | 70305.0 |
| fha domain-containing protein | SAMN02910280_0877 | Not Available | Positive | 550385 - 550804 | 15798.2 |
| cell division protein ftsw | SAMN02910280_0878 | Not Available | Positive | 550794 - 552086 | 47598.4 |
| penicillin binding protein transpeptidase domain-containing protein | SAMN02910280_0879 | Not Available | Positive | 552083 - 553444 | 50274.6 |
| putative sigma-54 modulation protein | SAMN02910280_0880 | Not Available | Positive | 553586 - 554113 | 20341.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
