Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein rada/sms | SAMN02910280_0418 | Not Available | Negative | 46278 - 47651 | 49459.6 |
| hypothetical protein | SAMN02910280_0419 | Not Available | Negative | 47663 - 48724 | 39165.8 |
| hypothetical protein | SAMN02910280_0420 | Not Available | Negative | 48854 - 49213 | 14071.9 |
| carbohydrate binding module (family 35) | SAMN02910280_0421 | Not Available | Positive | 49433 - 52801 | 123342.0 |
| beta-galactosidase | SAMN02910280_0422 | Not Available | Negative | 52938 - 57257 | 158392.0 |
| putative gtp pyrophosphokinase | SAMN02910280_0423 | Not Available | Negative | 57471 - 58166 | 27181.9 |
| hypothetical protein | SAMN02910280_0424 | Not Available | Positive | 58308 - 58937 | 24216.9 |
| dna-binding transcriptional regulator, merr family | SAMN02910280_0425 | Not Available | Positive | 59063 - 59791 | 27330.8 |
| rhamnogalacturonan endolyase | SAMN02910280_0426 | Not Available | Positive | 60152 - 62938 | 100634.0 |
| predicted dehydrogenase | SAMN02910280_0427 | Not Available | Negative | 63252 - 64232 | 36784.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
