Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910280_0850 | Not Available | Negative | 521318 - 521782 | 17092.3 |
| dna-directed rna polymerase, subunit rpc12/rpop, contains c4-type zn-finger | SAMN02910280_0851 | Not Available | Negative | 521795 - 522874 | 40077.2 |
| membrane protease subunit, stomatin/prohibitin family, contains c-terminal zn-ribbon domain | SAMN02910280_0852 | Not Available | Negative | 522947 - 524287 | 48314.1 |
| transcriptional regulator, spx/mgsr family | SAMN02910280_0853 | Not Available | Negative | 524468 - 524809 | 13233.9 |
| beta-glucosidase | SAMN02910280_0854 | Not Available | Negative | 524812 - 527580 | 102245.0 |
| rubrerythrin | SAMN02910280_0855 | Not Available | Negative | 527723 - 528274 | 20141.9 |
| anaerobic ribonucleoside-triphosphate reductase | SAMN02910280_0856 | Not Available | Negative | 528345 - 528611 | 10335.2 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN02910280_0857 | Not Available | Positive | 528716 - 529384 | 25123.3 |
| undecaprenyl-diphosphatase | SAMN02910280_0858 | Not Available | Positive | 529486 - 530349 | 32008.2 |
| hypothetical protein | SAMN02910280_0859 | Not Available | Negative | 530380 - 530619 | 9008.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
