Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate dehydrogenase (nadp) | SAMN02910280_0800 | Not Available | Negative | 472946 - 474157 | 45887.7 |
| trax protein | SAMN02910280_0801 | Not Available | Negative | 474201 - 474923 | 27935.8 |
| aconitase | SAMN02910280_0802 | Not Available | Negative | 474937 - 476874 | 69094.6 |
| atp-binding cassette, subfamily b | SAMN02910280_0803 | Not Available | Negative | 477003 - 478742 | 63997.1 |
| atp-binding cassette, subfamily b | SAMN02910280_0804 | Not Available | Negative | 478735 - 480468 | 63173.1 |
| udp-n-acetylglucosamine/udp-n- acetylgalactosaminediphosphorylase | SAMN02910280_0805 | Not Available | Negative | 480546 - 481778 | 45722.9 |
| hypothetical protein | SAMN02910280_0806 | Not Available | Negative | 481931 - 482827 | 33333.7 |
| sortase a | SAMN02910280_0807 | Not Available | Negative | 482824 - 483513 | 25273.1 |
| hypothetical protein | SAMN02910280_0808 | Not Available | Negative | 483513 - 484301 | 28083.0 |
| lysophospholipase l1 | SAMN02910280_0809 | Not Available | Negative | 484396 - 485481 | 40999.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
