Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted thioesterase | SAMN02910280_0780 | Not Available | Positive | 451667 - 452056 | 13968.8 |
| serine protease do | SAMN02910280_0781 | Not Available | Negative | 452092 - 453555 | 52693.5 |
| protein of unknown function | SAMN02910280_0782 | Not Available | Positive | 454517 - 454807 | 11136.7 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | SAMN02910280_0783 | Not Available | Negative | 455130 - 455630 | 18535.0 |
| ribonucleoside-triphosphate reductase class iii catalytic subunit | SAMN02910280_0784 | Not Available | Negative | 455640 - 457958 | 86877.3 |
| hypothetical protein | SAMN02910280_0785 | Not Available | Negative | 458205 - 459056 | 30787.2 |
| hypothetical protein | SAMN02910280_0786 | Not Available | Positive | 459264 - 459614 | 12940.8 |
| orotate phosphoribosyltransferase | SAMN02910280_0787 | Not Available | Positive | 459657 - 460310 | 23998.2 |
| putative transport protein | SAMN02910280_0788 | Not Available | Negative | 460346 - 461557 | 43029.0 |
| succinate dehydrogenase / fumarate reductase flavoprotein subunit | SAMN02910280_0789 | Not Available | Negative | 461627 - 463228 | 57303.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
