Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation-transporting atpase e | SAMN02910280_0408 | Not Available | Positive | 32734 - 35121 | 87260.0 |
| copper chaperone copz | SAMN02910280_0409 | Not Available | Negative | 35361 - 35612 | 9229.39 |
| sh3 domain-containing protein | SAMN02910280_0410 | Not Available | Positive | 35805 - 37121 | 47073.2 |
| acyl-coa thioester hydrolase | SAMN02910280_0411 | Not Available | Negative | 37411 - 37845 | 17026.6 |
| cardiolipin synthase | SAMN02910280_0412 | Not Available | Positive | 37982 - 39514 | 57686.2 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN02910280_0413 | Not Available | Negative | 39606 - 40157 | 21200.0 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910280_0414 | Not Available | Negative | 40129 - 42102 | 73516.0 |
| carbohydrate binding domain-containing protein | SAMN02910280_0415 | Not Available | Negative | 42576 - 43985 | 52822.0 |
| hypothetical protein | SAMN02910280_0416 | Not Available | Negative | 44128 - 44586 | 17525.5 |
| beta-n-acetylhexosaminidase | SAMN02910280_0417 | Not Available | Negative | 44677 - 46161 | 53244.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
