Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit clpx | SAMN02910280_0760 | Not Available | Negative | 434269 - 435555 | 47136.0 |
| atp-dependent clp protease, protease subunit | SAMN02910280_0761 | Not Available | Negative | 435566 - 436156 | 21455.8 |
| trigger factor | SAMN02910280_0762 | Not Available | Negative | 436260 - 437552 | 48460.0 |
| hypothetical protein | SAMN02910280_0763 | Not Available | Negative | 437654 - 438346 | 26925.2 |
| threonine synthase | SAMN02910280_0764 | Not Available | Negative | 438348 - 439841 | 54897.1 |
| putative endonuclease | SAMN02910280_0765 | Not Available | Negative | 439854 - 440231 | 14132.0 |
| rnase hii | SAMN02910280_0766 | Not Available | Negative | 440224 - 440841 | 22982.7 |
| ribosome biogenesis gtpase a | SAMN02910280_0767 | Not Available | Negative | 440841 - 441722 | 32624.9 |
| signal peptidase i | SAMN02910280_0768 | Not Available | Negative | 441757 - 442509 | 28131.1 |
| large subunit ribosomal protein l19 | SAMN02910280_0769 | Not Available | Negative | 442628 - 442972 | 12889.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
