Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trp operon repressor family | SAMN02910280_0700 | Not Available | Negative | 380769 - 381071 | 11391.7 |
| atp-dependent lon protease | SAMN02910280_0701 | Not Available | Positive | 381544 - 383886 | 86723.3 |
| gtp-binding protein | SAMN02910280_0702 | Not Available | Positive | 383902 - 384510 | 22982.4 |
| diaminopimelate decarboxylase | SAMN02910280_0703 | Not Available | Positive | 384536 - 385834 | 47406.8 |
| hypothetical protein | SAMN02910280_0704 | Not Available | Negative | 385869 - 386813 | 35353.4 |
| shikimate kinase | SAMN02910280_0705 | Not Available | Positive | 386970 - 387479 | 18683.9 |
| septum site-determining protein mind | SAMN02910280_0706 | Not Available | Positive | 387674 - 388411 | 26345.2 |
| methylglyoxal synthase | SAMN02910280_0707 | Not Available | Positive | 388454 - 388855 | 14382.6 |
| histidyl-trna synthetase | SAMN02910280_0708 | Not Available | Positive | 388922 - 390256 | 49924.9 |
| aspartyl-trna synthetase | SAMN02910280_0709 | Not Available | Positive | 390258 - 392036 | 67192.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
