Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN02910280_0690 | Not Available | Positive | 363195 - 364202 | 37761.9 |
| putative abc transport system atp-binding protein | SAMN02910280_0691 | Not Available | Positive | 364330 - 365013 | 25117.2 |
| putative abc transport system permease protein | SAMN02910280_0692 | Not Available | Positive | 365010 - 367820 | 105970.0 |
| uncharacterized membrane protein yjjp, duf1212 family | SAMN02910280_0693 | Not Available | Negative | 367854 - 369176 | 47937.6 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN02910280_0694 | Not Available | Negative | 369288 - 369914 | 23133.1 |
| histidine kinase | SAMN02910280_0695 | Not Available | Negative | 369911 - 371572 | 62599.0 |
| hypothetical protein | SAMN02910280_0696 | Not Available | Negative | 371645 - 374089 | 88919.9 |
| amp-binding enzyme | SAMN02910280_0697 | Not Available | Positive | 374338 - 375381 | 38157.0 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN02910280_0698 | Not Available | Positive | 375718 - 377655 | 72445.8 |
| cellulose binding domain-containing protein | SAMN02910280_0699 | Not Available | Negative | 377784 - 380702 | 108020.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
