Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910280_0680 | Not Available | Positive | 352131 - 353024 | 31665.9 |
| solute:na+ symporter, sss family | SAMN02910280_0681 | Not Available | Negative | 353107 - 354696 | 56479.9 |
| ribosomal protein s18 acetylase rimi | SAMN02910280_0682 | Not Available | Negative | 354878 - 355333 | 17384.1 |
| Trna-leu | Not Available | Not Available | Positive | 355393 - 355476 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 355518 - 355594 | Not Available |
| hypothetical protein | SAMN02910280_0685 | Not Available | Positive | 355815 - 358181 | 83883.5 |
| arabinan endo-1,5-alpha-l-arabinosidase | SAMN02910280_0686 | Not Available | Negative | 358221 - 360974 | 100612.0 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN02910280_0687 | Not Available | Positive | 361229 - 362161 | 33214.0 |
| hypothetical protein | SAMN02910280_0688 | Not Available | Positive | 362225 - 362407 | 6202.46 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN02910280_0689 | Not Available | Positive | 362404 - 363198 | 29455.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
