Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN02910280_0660 | Not Available | Positive | 329423 - 331321 | 69728.7 |
| 23s rrna (cytidine1920-2'-o)/16s rrna (cytidine1409-2'-o)-methyltransferase | SAMN02910280_0661 | Not Available | Positive | 331308 - 332093 | 28351.9 |
| nad+ kinase | SAMN02910280_0662 | Not Available | Positive | 332105 - 332959 | 31116.3 |
| transcriptional regulator, argr family | SAMN02910280_0663 | Not Available | Positive | 332976 - 333419 | 16453.0 |
| dna repair protein recn (recombination protein n) | SAMN02910280_0664 | Not Available | Positive | 333429 - 335090 | 61441.5 |
| probable phosphoglycerate mutase | SAMN02910280_0665 | Not Available | Positive | 335104 - 335643 | 20396.3 |
| beta-galactosidase | SAMN02910280_0666 | Not Available | Positive | 335656 - 337626 | 74867.8 |
| d-tyrosyl-trna(tyr) deacylase | SAMN02910280_0667 | Not Available | Positive | 337633 - 338067 | 16011.2 |
| penicillin-binding protein 2 | SAMN02910280_0668 | Not Available | Positive | 338148 - 339758 | 59059.3 |
| alanyl-trna synthetase | SAMN02910280_0669 | Not Available | Positive | 340085 - 342715 | 95743.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
