Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate o-acetyltransferase complex protein algi | SAMN02910280_0620 | Not Available | Negative | 290352 - 291752 | 52754.5 |
| regulator of protease activity hflc, stomatin/prohibitin superfamily | SAMN02910280_0621 | Not Available | Negative | 292027 - 293052 | 37830.2 |
| membrane protein implicated in regulation of membrane protease activity | SAMN02910280_0622 | Not Available | Negative | 293099 - 293533 | 15700.5 |
| unsaturated rhamnogalacturonyl hydrolase | SAMN02910280_0623 | Not Available | Negative | 293658 - 294779 | 42968.3 |
| oligogalacturonide transport system permease protein | SAMN02910280_0624 | Not Available | Negative | 294776 - 295603 | 30800.6 |
| oligogalacturonide transport system permease protein | SAMN02910280_0625 | Not Available | Negative | 295603 - 296478 | 32054.2 |
| oligogalacturonide transport system substrate-binding protein | SAMN02910280_0626 | Not Available | Negative | 296475 - 297782 | 47731.8 |
| rna polymerase sporulation-specific sigma factor | SAMN02910280_0627 | Not Available | Negative | 297930 - 298703 | 29254.3 |
| pyridoxine kinase | SAMN02910280_0628 | Not Available | Negative | 298814 - 299665 | 31599.1 |
| protein of unknown function | SAMN02910280_0629 | Not Available | Positive | 299945 - 300784 | 31078.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
