Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tfox n-terminal domain-containing protein | SAMN02910280_0600 | Not Available | Positive | 261612 - 261929 | 12162.9 |
| beta-xylosidase, gh43 family | SAMN02910280_0601 | Not Available | Positive | 261944 - 264835 | 106379.0 |
| phage integrase family protein | SAMN02910280_0602 | Not Available | Negative | 265238 - 266281 | 40354.4 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN02910280_0603 | Not Available | Positive | 266636 - 267304 | 24447.8 |
| abc-2 type transport system atp-binding protein | SAMN02910280_0604 | Not Available | Positive | 267385 - 268299 | 33350.4 |
| hypothetical protein | SAMN02910280_0605 | Not Available | Positive | 268292 - 269014 | 26343.2 |
| hypothetical protein | SAMN02910280_0606 | Not Available | Positive | 269025 - 269900 | 32830.9 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN02910280_0607 | Not Available | Negative | 270192 - 271466 | 47158.0 |
| transglutaminase-like superfamily protein | SAMN02910280_0608 | Not Available | Positive | 271797 - 273365 | 56453.9 |
| hypothetical protein | SAMN02910280_0609 | Not Available | Positive | 273489 - 274406 | 35812.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
