Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein, pyridoxamine 5'-phosphate oxidase (pnpox-like) family | SAMN02910280_0388 | Not Available | Positive | 9886 - 10281 | 14939.0 |
| putative efflux protein, mate family | SAMN02910280_0389 | Not Available | Negative | 10338 - 11639 | 47532.4 |
| uncharacterized conserved protein, duf1015 family | SAMN02910280_0390 | Not Available | Negative | 11945 - 13213 | 46994.9 |
| septum formation protein | SAMN02910280_0391 | Not Available | Negative | 13373 - 13930 | 20031.0 |
| putative efflux protein, mate family | SAMN02910280_0392 | Not Available | Positive | 14161 - 15645 | 52492.6 |
| glycosidase | SAMN02910280_0393 | Not Available | Negative | 16149 - 17735 | 61368.4 |
| hd domain-containing protein | SAMN02910280_0394 | Not Available | Negative | 17758 - 18360 | 23060.2 |
| gmp synthase (glutamine-hydrolysing) | SAMN02910280_0395 | Not Available | Positive | 18714 - 20267 | 57766.2 |
| Trna-ala | Not Available | Not Available | Positive | 20640 - 20712 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 20855 - 20938 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
