Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protoporphyrinogen oxidase | SAMN02910280_0560 | Not Available | Negative | 220604 - 222163 | 59419.4 |
| phosphomethylpyrimidine synthase | SAMN02910280_0561 | Not Available | Negative | 222707 - 224020 | 48218.2 |
| putative hydroxymethylpyrimidine transporter cytx | SAMN02910280_0562 | Not Available | Negative | 224043 - 225236 | 42187.8 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | SAMN02910280_0563 | Not Available | Negative | 225236 - 226042 | 28126.8 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN02910280_0564 | Not Available | Positive | 226557 - 227336 | 28343.3 |
| flavodoxin domain-containing protein | SAMN02910280_0565 | Not Available | Positive | 227377 - 228129 | 28403.4 |
| dna-binding protein hu-beta | SAMN02910280_0566 | Not Available | Positive | 228439 - 228714 | 9681.76 |
| hypothetical protein | SAMN02910280_0567 | Not Available | Positive | 228733 - 229164 | 14938.2 |
| hypothetical protein | SAMN02910280_0568 | Not Available | Negative | 229449 - 230447 | 37450.0 |
| pectate lyase | SAMN02910280_0569 | Not Available | Positive | 230769 - 234197 | 120984.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
