Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannan endo-1,4-beta-mannosidase | SAMN02910280_0519 | Not Available | Positive | 169030 - 171027 | 73210.6 |
| glycosyl hydrolase family 9 | SAMN02910280_0520 | Not Available | Positive | 171067 - 173793 | 100389.0 |
| cell division protease ftsh | SAMN02910280_0521 | Not Available | Positive | 173909 - 175351 | 51702.9 |
| stage ii sporulation protein r | SAMN02910280_0522 | Not Available | Positive | 175394 - 176053 | 24254.8 |
| translation initiation factor if-3 | SAMN02910280_0523 | Not Available | Positive | 176254 - 176778 | 19608.8 |
| large subunit ribosomal protein l35 | SAMN02910280_0524 | Not Available | Positive | 176792 - 176995 | 7621.51 |
| large subunit ribosomal protein l20 | SAMN02910280_0525 | Not Available | Positive | 177063 - 177416 | 13125.5 |
| rna methyltransferase, trmh family | SAMN02910280_0526 | Not Available | Positive | 177545 - 178333 | 28354.4 |
| dna processing protein | SAMN02910280_0527 | Not Available | Positive | 178371 - 179591 | 44220.8 |
| dna topoisomerase-1 | SAMN02910280_0528 | Not Available | Positive | 179604 - 181685 | 77811.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
