Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinamidase-related amidase | SAMN02910280_0509 | Not Available | Negative | 158986 - 159513 | 19130.3 |
| phosphoserine phosphatase | SAMN02910280_0510 | Not Available | Negative | 159562 - 160164 | 22326.1 |
| uncharacterized membrane protein | SAMN02910280_0511 | Not Available | Negative | 160408 - 160881 | 16868.6 |
| penicillin binding protein transpeptidase domain-containing protein | SAMN02910280_0512 | Not Available | Positive | 161052 - 162506 | 51998.2 |
| penicillin binding protein transpeptidase domain-containing protein | SAMN02910280_0513 | Not Available | Positive | 162677 - 164143 | 53857.8 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN02910280_0514 | Not Available | Positive | 164210 - 166207 | 73303.3 |
| spore coat associated protein ja (cotja) | SAMN02910280_0515 | Not Available | Positive | 166341 - 166604 | 9681.36 |
| spore coat protein jb | SAMN02910280_0516 | Not Available | Positive | 166601 - 166849 | 10176.1 |
| spore coat protein jc | SAMN02910280_0517 | Not Available | Positive | 166853 - 167464 | 23097.6 |
| leucine rich repeat-containing protein | SAMN02910280_0518 | Not Available | Positive | 167929 - 168828 | 32853.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
