Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN02910280_0498 | Not Available | Positive | 148780 - 149538 | 28621.1 |
| hypothetical protein | SAMN02910280_0499 | Not Available | Positive | 149569 - 150282 | 26299.5 |
| signal peptidase, endoplasmic reticulum-type | SAMN02910280_0500 | Not Available | Positive | 150301 - 151173 | 31830.0 |
| hypothetical protein | SAMN02910280_0501 | Not Available | Positive | 151215 - 152792 | 60036.8 |
| signal peptidase i | SAMN02910280_0502 | Not Available | Positive | 152820 - 155780 | 114850.0 |
| hypothetical protein | SAMN02910280_0503 | Not Available | Positive | 155761 - 156195 | 16648.3 |
| hypothetical protein | SAMN02910280_0504 | Not Available | Positive | 156214 - 156441 | 8796.84 |
| Tmrna,resume consensus sequence (at 88): tataaacgcaagaaataa | Not Available | Not Available | Positive | 156643 - 157012 | Not Available |
| ssra-binding protein | SAMN02910280_0507 | Not Available | Negative | 157533 - 157997 | 17876.8 |
| nad+ synthase | SAMN02910280_0508 | Not Available | Negative | 158220 - 158969 | 27477.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
