Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase-like superfamily protein | SAMN02910280_0488 | Not Available | Negative | 135305 - 136714 | 51459.8 |
| hypothetical protein | SAMN02910280_0489 | Not Available | Negative | 136845 - 138014 | 42789.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02910280_0490 | Not Available | Negative | 138011 - 138472 | 17918.4 |
| serpin b | SAMN02910280_0491 | Not Available | Negative | 138855 - 140399 | 57936.4 |
| lincosamide and streptogramin a transport system atp-binding/permease protein | SAMN02910280_0492 | Not Available | Positive | 140849 - 142375 | 58387.6 |
| Trna-gly | Not Available | Not Available | Positive | 142467 - 142538 | Not Available |
| nicotinamidase-related amidase | SAMN02910280_0494 | Not Available | Negative | 142592 - 143107 | 19247.1 |
| transcriptional regulator, tetr family | SAMN02910280_0495 | Not Available | Negative | 143118 - 143690 | 21449.2 |
| lamin tail domain | SAMN02910280_0496 | Not Available | Negative | 143796 - 146519 | 101606.0 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN02910280_0497 | Not Available | Negative | 146841 - 148031 | 45287.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
